论文标题

COMMSVAE:使用耦合的顺序VAE学习大脑的宏观沟通动态

CommsVAE: Learning the brain's macroscale communication dynamics using coupled sequential VAEs

论文作者

Geenjaar, Eloy, Lewis, Noah, Kashyap, Amrit, Miller, Robyn, Calhoun, Vince

论文摘要

复杂系统内部或之间的通信在自然科学和图形神经网络等领域很普遍。大脑是这样一个复杂系统的完美例子,在这种系统中,大脑区域之间的交流不断精心策划。为了分析通信,大脑通常被分为每个执行某些计算的解剖区域。这些区域必须互动并互动以执行任务并支持高级认知。在宏观上,这些区域通过沿着皮质的信号传播和沿着白质的传播在更长的距离上进行通信。随着时间的流逝,何时何时传达了哪种类型的信号是一个未解决的问题,通常使用功能或结构数据研究。在本文中,我们提出了一种非线性生成方法来从功能数据进行通信。我们通过明确建模沟通的方向性,在每个时间步段找到沟通并鼓励稀疏性来解决三个问题。为了评估我们的模型,我们模拟了嵌入其中节点之间稀疏通信的时间数据,并表明我们的模型可以揭示预期的通信动态。随后,我们将模型应用于来自多个任务的时间神经数据,并表明我们的方法模型通信对每个任务更为特定。我们方法的特异性意味着它可以影响对精神疾病的理解,这被认为与对照组相比与大脑区域之间高度特定的交流有关。总而言之,我们提出了一个在图表上动态通信学习的通用模型,并显示了其对自然科学的子场的适用性,并具有潜在的广泛科学影响。

Communication within or between complex systems is commonplace in the natural sciences and fields such as graph neural networks. The brain is a perfect example of such a complex system, where communication between brain regions is constantly being orchestrated. To analyze communication, the brain is often split up into anatomical regions that each perform certain computations. These regions must interact and communicate with each other to perform tasks and support higher-level cognition. On a macroscale, these regions communicate through signal propagation along the cortex and along white matter tracts over longer distances. When and what types of signals are communicated over time is an unsolved problem and is often studied using either functional or structural data. In this paper, we propose a non-linear generative approach to communication from functional data. We address three issues with common connectivity approaches by explicitly modeling the directionality of communication, finding communication at each timestep, and encouraging sparsity. To evaluate our model, we simulate temporal data that has sparse communication between nodes embedded in it and show that our model can uncover the expected communication dynamics. Subsequently, we apply our model to temporal neural data from multiple tasks and show that our approach models communication that is more specific to each task. The specificity of our method means it can have an impact on the understanding of psychiatric disorders, which are believed to be related to highly specific communication between brain regions compared to controls. In sum, we propose a general model for dynamic communication learning on graphs, and show its applicability to a subfield of the natural sciences, with potential widespread scientific impact.

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