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In the process of collecting data from sensors, several circumstances can affect their continuity and validity, resulting in alterations of the data or loss of information. Although classical methods of statistics, such as interpolation-like techniques, can be used to approximate the missing data in a time series, the recent developments in Deep Learning (DL) have given impetus to innovative and much more accurate forecasting techniques. In the present paper, we develop two DL models aimed at filling data gaps, for the specific case of internal temperature time series obtained from monitored apartments located in Bolzano, Italy. The DL models developed in the present work are based on the combination of Convolutional Neural Networks (CNNs), Long Short-Term Memory Neural Networks (LSTMs), and Bidirectional LSTMs (BiLSTMs). Two key features of our models are the use of both pre- and post-gap data, and the exploitation of a correlated time series (the external temperature) in order to predict the target one (the internal temperature). Our approach manages to capture the fluctuating nature of the data and shows good accuracy in reconstructing the target time series. In addition, our models significantly improve the already good results from another DL architecture that is used as a baseline for the present work.