论文标题

评估具有神经网络电位的溶液中chalcogen键的持续性

Assessing the persistence of chalcogen bonds in solution with neural network potentials

论文作者

Juraskova, Veronika, Celerse, Frederic, Laplaza, Ruben, Corminboeuf, Clemence

论文摘要

在催化,超分子化学和功能材料领域中,通常将非共价键合模式作为设计原理。然而,他们的计算描述通常忽略了有限的温度和环境影响,从而促进竞争相互作用并改变其静态气相特性。最近,对密度功能理论(DFT)数据训练的神经网络电位(NNP)变得越来越流行,以模拟凝结相的分子现象,其准确性与从头开始方法相当。迄今为止,大多数应用都集中在固态材料或相当简单的分子上,由有限数量的元素制成。在此,我们专注于在凝结阶段涉及苯并核二唑的硫基键的持久性和强度。虽然已知含牙龈牙菌药的异源分子与阴离子和孤对不同原子表现出明显的相互作用,但竞争竞争性分子间相互作用的相关性,尤其是与溶剂相关的相关性,对于在实验中进行了复杂的态度,并且在实验中也很复杂,但在准确的电子结构水平上对模型进行了挑战。在这里,我们训练直接和基本的NNP,以重现混合DFT能量和力,以确定在溶质-CL $^ - $ - $ - $ - $ - $ - $ - $ - $ - thf混合物中发生的最普遍的非共价相互作用。显式溶剂中的仿真突出了与溶剂形成的chalcogen键和相互作用的短距离方向性的明确竞争,并对溶液中分子特性的直接后果产生直接影响。与其他电势的比较(例如,变形虫,直接NNP和连续溶剂模型)还表明,基准NNP提供了可靠的溶液中非共价相互作用相互作用的可靠图片。

Non-covalent bonding patterns are commonly harvested as a design principle in the field of catalysis, supramolecular chemistry and functional materials to name a few. Yet, their computational description generally neglects finite temperature and environment effects, which promote competing interactions and alter their static gas-phase properties. Recently, neural network potentials (NNPs) trained on Density Functional Theory (DFT) data have become increasingly popular to simulate molecular phenomena in condensed phase with an accuracy comparable to ab initio methods. To date, most applications have centered on solid-state materials or fairly simple molecules made of a limited number of elements. Herein, we focus on the persistence and strength of chalcogen bonds involving a benzotelluradiazole in condensed phase. While the tellurium-containing heteroaromatic molecules are known to exhibit pronounced interactions with anions and lone pairs of different atoms, the relevance of competing intermolecular interactions, notably with the solvent, is complicated to monitor experimentally but also challenging to model at an accurate electronic structure level. Here, we train direct and baselined NNPs to reproduce hybrid DFT energies and forces in order to identify what are the most prevalent non-covalent interactions occurring in a solute-Cl$^-$-THF mixture. The simulations in explicit solvent highlight the clear competition with chalcogen bonds formed with the solvent and the short-range directionality of the interaction with direct consequences for the molecular properties in the solution. The comparison with other potentials (e.g., AMOEBA, direct NNP and continuum solvent model) also demonstrates that baselined NNPs offer a reliable picture of the non-covalent interaction interplay occurring in solution.

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