论文标题

人胎盘中的单细胞转录组研究

Single Cell Transcriptome Research in Human Placenta

论文作者

Li, Hui, Huang, Qianhui, Liu, Yu, Garmire, Lana X

论文摘要

人胎盘是支持胎儿发育的母亲与胎儿之间的复杂且异质的器官接口。胎盘结构成分的改变与各种妊娠并发症有关。为了揭示正常和患病胎盘中各种胎盘细胞类型之间的异质性,以及在胎盘细胞群体中阐明分子相互作用,在过去的几年中已采用了一种称为单细胞RNA-SEQ(或SCRNA-SEQ)的新基因组技术。在这里,我们回顾了SCRNA-Seq技术的原理,并总结了妊娠年龄以及妊娠并发症(例如早产出生和先兆子痫)的最新人类胎盘研究。我们列出了用于公共使用的计算分析平台和资源。最后,我们讨论了胎盘单细胞研究的未来感兴趣领域,以及完成它们所需的数据分析。

Human placenta is a complex and heterogeneous organ interfacing between the mother and the fetus that supports fetal development. Alterations to placental structural components are associated with various pregnancy complications. To reveal the heterogeneity among various placenta cell types in normal and diseased placentas, as well as elucidate molecular interactions within a population of placental cells, a new genomics technology called single cell RNA-Seq (or scRNA-seq) has been employed in the last couple of years. Here we review the principles of scRNA-seq technology, and summarize the recent human placenta studies at scRNA-seq level across gestational ages as well as in pregnancy complications such as preterm birth and preeclampsia. We list the computational analysis platforms and resources available for the public use. Lastly, we discuss the future areas of interest for placenta single cell studies, as well as the data analytics needed to accomplish them.

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