论文标题

通过对芯片照明引起的强度波动的强度波动进行应用,片上TIRF纳米镜检查

On-chip TIRF nanoscopy by applying Haar wavelet kernel analysis on intensity fluctuations induced by chip illumination

论文作者

Jayakumar, Nikhil, Helle, Øystein I, Agarwal, Krishna, Ahluwalia, Balpreet Singh

论文摘要

基于光子芯片的TIRF照明已用于证明几种片上光学纳米镜方法。样品是由光向指导内部的电磁波模式产生的evanevancent场照明的。除了荧光团的光动力学外,还可以进一步利用波导模式,以引入受控强度波动,以通过诸如超分辨率光波动成像(SOFI)之类的技术剥削。但是,模式产生的不均匀照明模式的问题导致了重建图像中的伪影。为了减轻此问题,我们建议在应用(SOFI)之前对原始图像堆栈进行HAAR小波内核(HAWK)分析。霍克产生的计算图像堆栈比原始堆栈具有更高时空的稀疏性。在多模型的非均匀照明模式的情况下,Hawk处理BRE AKS在引入时空的稀疏性同时采用模式模式,从而差异地影响了照明的不均匀性。因此,这有助于SOFI等纳米镜方法更好地支持超分辨率,否则,由于原始图像中模式模式的空间相关性否则会损害。此外,在Sofi之前应用鹰会减轻由于不均匀照明而不会降低时间分辨率而导致的伪影问题。我们的实验结果表明,通过Hawk和Sofi的组合,分辨率增强以及伪像减少。

Photonic-chip based TIRF illumination has been used to demonstrate several on-chip optical nanoscopy methods. The sample is illuminated by the evanescent field generated by the electromagnetic wave modes guided inside the optical waveguide. In addition to the photokinetics of the fluorophores, the waveguide modes can be further exploited for introducing controlled intensity fluctuations for exploitation by techniques such as super-resolution optical fluctuation imaging (SOFI). However, the problem of non-uniform illumination pattern generated by the modes contribute to artifacts in the reconstructed image. To alleviate this problem, we propose to perform Haar wavelet kernel (HAWK) analysis on the original image stack prior to the application of (SOFI). HAWK produces a computational image stack with higher spatio-temporal sparsity than the original stack. In the case of multimoded non-uniform illumination patterns, HAWK processing bre aks the mode pattern while introducing spatio-temporal sparsity, thereby differentially affecting the non-uniformity of the illumination. Consequently, this assists nanoscopy methods such as SOFI to better support super-resolution, which is otherwise compromised due to spatial correlation of the mode patterns in the raw image. Furthermore, applying HAWK prior to SOFI alleviates the problem of artifacts due to non-uniform illumination without degrading temporal resolution. Our experimental results demonstrate resolution enhancement as well as reduction in artifacts through the combination of HAWK and SOFI.

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