论文标题

时间和地点:估计异国害虫和病原体引言的日期和位置

When and where: estimating the date and location of introduction for exotic pests and pathogens

论文作者

Hefley, Trevor J., Russell, Robin E., Ballmann, Anne E., Zhang, Haoyu

论文摘要

在新型疾病爆发或入侵异国有害生物的一个基本问题是:在哪个地点和日期首次引入?有了这些信息,可以预料甚至可以避免未来的介绍。点过程模型通常用于映射物种分布和疾病发生。如果已知介绍的时间和位置,则可以使用点过程模型来绘制和了解影响引入的因素。但是,很少直接观察到引言过程。我们建议将点过程嵌入分层贝叶斯模型中,该模型通常用于理解入侵的时空动力学。包括分层贝叶斯模型中的点过程可以推断出对该过程(例如物种或疾病发生记录)间接观察的位置和日期。我们说明了使用收集的疾病监测数据来监测白鼻综合症的方法,这是一种威胁许多北美蝙蝠物种的真菌疾病。我们使用模型和监视数据来估计病原体引入美国的位置和日期。最后,我们将从模型的预测与从基于最新回归的统计和机器学习方法获得的预测进行了比较。我们的结果表明,在首次检测前4年引入了引起白鼻综合征的病原体,但该估计值中存在中等水平的不确定性。引言的位置可能位于第一次发现的位置以东510公里,但我们的结果表明,首次检测的位置可能是引言的位置。

A fundamental question during the outbreak of a novel disease or invasion of an exotic pest is: At what location and date was it first introduced? With this information, future introductions can be anticipated and perhaps avoided. Point process models are commonly used for mapping species distribution and disease occurrence. If the time and location of introductions were known, then point process models could be used to map and understand the factors that influence introductions; however, rarely is the process of introduction directly observed. We propose embedding a point process within hierarchical Bayesian models commonly used to understand the spatio-temporal dynamics of invasion. Including a point process within a hierarchical Bayesian model enables inference regarding the location and date of introduction from indirect observation of the process such as species or disease occurrence records. We illustrate our approach using disease surveillance data collected to monitor white-nose syndrome, which is a fungal disease that threatens many North American species of bats. We use our model and surveillance data to estimate the location and date that the pathogen was introduced into the United States. Finally, we compare forecasts from our model to forecasts obtained from state-of-the-art regression-based statistical and machine learning methods. Our results show that the pathogen causing white-nose syndrome was most likely introduced into the United States 4 years prior to the first detection, but there is a moderate level of uncertainty in this estimate. The location of introduction could be up to 510 km east of the location of first discovery, but our results indicate that there is a relatively high probability the location of first detection could be the location of introduction.

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